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Wednesday, September 9, 2009

SBW FluxBalance Module – Step 2

Some time ago I’ve implemented a basic FluxBalance SBW Module. It never was that useful really, all one could do was to load an SBML file and to define a couple of constraints and objectives. So while Brett Olivier is visiting Seattle, we sat together and came up with a scheme to store this sort of Information. This resulted in the next version of the FluxBalance tool:

2009-09-09_-_FBA

This new version does not do much more than it did before, however now at least it stores the constraint and objective function in an SBML compliant annotation (which hopefully later on becomes an official SBML Level 3 package for flux balance analysis).

There is a new Windows Installer, that you can try right away …

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