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Friday, June 8, 2012

SBML Spatial Extension & Simulation

As part of my new job at the University of Heidelberg I get to work again on spatial simulations. While trying to get my feet wet, I was able to experiment with a spatial simulator by Akira Funahasi’s group (see also his presentation at last years COMBINE). So today I just wanted to share the resulting video with you:

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It always is fascinating watching these things. And the real amazing thing is that this is not a hard coded simulation, but one that is interpreted from an SBML file. And while it probably will take a while until we are regularly exchanging spatial models we are definitely on the right way!

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